WorkflowHub
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Welcome to WorkflowHub

Want to join the WorkflowHub community? See our current activities and upcoming meetings here.
1,240+
Workflows
310
Teams
28
Workflow types
4.6k
Contributors
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Registry insights new

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Workflows by type

Share of the registry, by workflow language

Galaxy520
Nextflow240
Snakemake165
CWL140
Jupyter95
KNIME45
Other35

Workflows uploaded over time

Cumulative total registered, 2020–2026

1200 800 400 0 2020 2021 2022 2023 2024 2025 2026

Featured workflows new

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Eco-Flow: synteny analysis

A Nextflow pipeline for gene-wise synteny across genome assemblies, built to nf-core standards.

Eco-FlowNextflowupdated 3d

nf-core/genomeqc

Quality-control reporting for genome assemblies and annotations, with per-species summaries.

nf-coreNextflowupdated 1w

EXCON: gene family dynamics

Expansion/contraction analysis with CAFE5 and OrthoFinder across large Hymenoptera datasets.

Sumner LabNextflowupdated 2w

FAIR in practice

From a one-off script to reusable science: a wasp genome, made FAIR

When a comparative-genomics analysis was registered as a versioned, well-described workflow, another lab reran it in an afternoon — no chasing emails, no missing files. Small habits, big reuse.

Read the FAIR story →
FFindable
AAccessible
IInterop.
RReusable

Where the community works new

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London São Paulo Yaoundé Bengaluru Tokyo Sydney
41%
Europe
27%
Americas
17%
Asia-Pacific
9%
Africa
6%
Other

Workshops & training new

Full calendar →

Filter by region to find events near you.

All regions Europe Americas Africa Asia-Pacific Online
12
Mar

Intro to Nextflow & nf-core

In person · London, UK Europe
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24
Mar

FAIR workflows clinic

Online · 15:00 UTC Online
Join →
08
Apr

Reproducible pipelines with WorkflowHub

In person · São Paulo, BR Americas
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19
Apr

Genome QC hands-on workshop

In person · Yaoundé, CM Africa
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06
May

RO-Crate & workflow metadata

Online · 09:00 UTC Online
Join →
21
May

Workflows for ecology & evolution

In person · Sydney, AU Asia-Pacific
Register →

My WorkflowHub

Teams I administer

Other Teams I am a member of

My recent changes

A Nextflow pipeline to conduct a gene wise synteny analysis
Workflow · added 26 days ago
nf-core/genomeqc
Workflow · added 29 days ago

From the community new

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